Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR3Q9UNL2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 AL355312.1-201ENST00000407115 2176 ntBASIC16.15■□□□□ 0.18
SSR3Q9UNL2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR3Q9UNL2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.14■□□□□ 0.17
SSR3Q9UNL2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.13■□□□□ 0.17
SSR3Q9UNL2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 KRT18P5-201ENST00000436075 1291 ntBASIC16.13■□□□□ 0.17
SSR3Q9UNL2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms