Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 SDHAP2-201ENST00000455183 2001 ntBASIC16.76■□□□□ 0.27
DKK4Q9UBT3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 AC015911.4-201ENST00000588022 1070 ntBASIC16.76■□□□□ 0.27
DKK4Q9UBT3 AC005498.2-205ENST00000593218 784 ntBASIC16.76■□□□□ 0.27
DKK4Q9UBT3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.76■□□□□ 0.27
DKK4Q9UBT3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 ELK2BP-201ENST00000415014 1224 ntBASIC16.75■□□□□ 0.27
DKK4Q9UBT3 DDX43P3-201ENST00000441064 443 ntBASIC16.75■□□□□ 0.27
DKK4Q9UBT3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 AC096734.2-201ENST00000562054 433 ntBASIC16.75■□□□□ 0.27
DKK4Q9UBT3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 AC010654.1-201ENST00000615722 808 ntBASIC16.75■□□□□ 0.27
DKK4Q9UBT3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.75■□□□□ 0.27
DKK4Q9UBT3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.75■□□□□ 0.27
DKK4Q9UBT3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 AC141586.3-201ENST00000562166 1838 ntBASIC16.74■□□□□ 0.27
DKK4Q9UBT3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.74■□□□□ 0.27
DKK4Q9UBT3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DKK4Q9UBT3 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.73■□□□□ 0.27
DKK4Q9UBT3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DKK4Q9UBT3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.73■□□□□ 0.27
DKK4Q9UBT3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.73■□□□□ 0.27
DKK4Q9UBT3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DKK4Q9UBT3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DKK4Q9UBT3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.73■□□□□ 0.27
DKK4Q9UBT3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
DKK4Q9UBT3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DKK4Q9UBT3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.73■□□□□ 0.27
DKK4Q9UBT3 GK-202ENST00000378941 458 ntTSL 3 BASIC16.73■□□□□ 0.27
DKK4Q9UBT3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DKK4Q9UBT3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
DKK4Q9UBT3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms