Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNMT3BQ9UBC3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNMT3BQ9UBC3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 AC018445.3-201ENST00000624177 1945 ntBASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 RPS2P28-201ENST00000314255 741 ntBASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 ANO7L1-203ENST00000602586 1720 ntBASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3BQ9UBC3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 MIR940-201ENST00000401276 94 ntBASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.81■□□□□ 0.6
DNMT3BQ9UBC3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 RPS2P1-201ENST00000434010 821 ntBASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 TERC-201ENST00000602385 541 ntBASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 ZNF259P1-201ENST00000407656 1365 ntBASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3BQ9UBC3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 PMS2P7-201ENST00000506558 1336 ntBASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 AL356309.3-201ENST00000624132 1934 ntBASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms