Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 TSPY14P-201ENST00000303979 915 ntBASIC15.07■□□□□ 0
LIN7CQ9NUP9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 EGLN1P1-201ENST00000531623 762 ntBASIC15.07■□□□□ 0
LIN7CQ9NUP9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 AC116562.4-202ENST00000641738 218 ntBASIC15.07■□□□□ 0
LIN7CQ9NUP9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
LIN7CQ9NUP9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.06■□□□□ 0
LIN7CQ9NUP9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LIN7CQ9NUP9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LIN7CQ9NUP9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.06■□□□□ 0
LIN7CQ9NUP9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.06■□□□□ 0
LIN7CQ9NUP9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LIN7CQ9NUP9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.06■□□□□ 0
LIN7CQ9NUP9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 MIR564-202ENST00000385049 94 ntBASIC15.06■□□□□ 0
LIN7CQ9NUP9 TSPY17P-201ENST00000450329 467 ntBASIC15.06■□□□□ 0
LIN7CQ9NUP9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.06■□□□□ 0
LIN7CQ9NUP9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.06■□□□□ 0
LIN7CQ9NUP9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.06■□□□□ 0
LIN7CQ9NUP9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.06■□□□□ 0
LIN7CQ9NUP9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.06■□□□□ 0
LIN7CQ9NUP9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.06■□□□□ 0
LIN7CQ9NUP9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.05■□□□□ 0
LIN7CQ9NUP9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.05■□□□□ 0
LIN7CQ9NUP9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.05■□□□□ 0
LIN7CQ9NUP9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
LIN7CQ9NUP9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
LIN7CQ9NUP9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
LIN7CQ9NUP9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LIN7CQ9NUP9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
LIN7CQ9NUP9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.05■□□□□ -0
LIN7CQ9NUP9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.05■□□□□ -0
LIN7CQ9NUP9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LIN7CQ9NUP9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LIN7CQ9NUP9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.05■□□□□ -0
LIN7CQ9NUP9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.05■□□□□ -0
LIN7CQ9NUP9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.05■□□□□ -0
LIN7CQ9NUP9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.05■□□□□ -0
LIN7CQ9NUP9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.05■□□□□ -0
LIN7CQ9NUP9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.05■□□□□ -0
LIN7CQ9NUP9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.05■□□□□ -0
LIN7CQ9NUP9 AC010947.1-201ENST00000623454 693 ntBASIC15.05■□□□□ -0
LIN7CQ9NUP9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LIN7CQ9NUP9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LIN7CQ9NUP9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LIN7CQ9NUP9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LIN7CQ9NUP9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.05■□□□□ -0
LIN7CQ9NUP9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.05■□□□□ -0
LIN7CQ9NUP9 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LIN7CQ9NUP9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms