Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 KRT8P9-201ENST00000558927 1449 ntBASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 RCC2P3-201ENST00000418112 1537 ntBASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 AL353807.1-201ENST00000427475 662 ntBASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 KRT16P5-201ENST00000455284 522 ntBASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 PRSS44-201ENST00000515154 1146 ntBASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 LINC01568-207ENST00000641790 1380 ntBASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2LQ9NUG4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 KRT18P55-202ENST00000578578 1546 ntBASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 UNC93B2-201ENST00000285383 730 ntBASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 AC113347.1-201ENST00000413321 391 ntBASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 RBM17P1-201ENST00000453646 1190 ntBASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 AP000525.1-201ENST00000608286 694 ntBASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2LQ9NUG4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms