Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN3Q9NQS3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
NECTIN3Q9NQS3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
NECTIN3Q9NQS3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NECTIN3Q9NQS3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NECTIN3Q9NQS3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NECTIN3Q9NQS3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN3Q9NQS3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
NECTIN3Q9NQS3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN3Q9NQS3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.37■□□□□ 0.37
NECTIN3Q9NQS3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
NECTIN3Q9NQS3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECTIN3Q9NQS3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.37■□□□□ 0.37
NECTIN3Q9NQS3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECTIN3Q9NQS3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 AC012313.1-201ENST00000593393 3059 ntBASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 AC112907.2-201ENST00000448639 330 ntBASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 AC034232.1-201ENST00000506026 1064 ntBASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 MYC-208ENST00000641036 567 ntBASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 AC112777.1-201ENST00000540175 1423 ntBASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 SIRPAP1-201ENST00000448467 1770 ntBASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 AC008764.6-201ENST00000595909 2069 ntBASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECTIN3Q9NQS3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 ARMC10P1-201ENST00000313754 855 ntBASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECTIN3Q9NQS3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms