Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CYLDQ9NQC7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYLDQ9NQC7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYLDQ9NQC7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CYLDQ9NQC7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CYLDQ9NQC7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CYLDQ9NQC7 DUTP2-201ENST00000519164 463 ntBASIC19.12■□□□□ 0.65
CYLDQ9NQC7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.12■□□□□ 0.65
CYLDQ9NQC7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYLDQ9NQC7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CYLDQ9NQC7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYLDQ9NQC7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYLDQ9NQC7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYLDQ9NQC7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CYLDQ9NQC7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 LINC00167-201ENST00000530583 1419 ntBASIC19.11■□□□□ 0.65
CYLDQ9NQC7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 AP002383.4-201ENST00000442518 975 ntBASIC19.11■□□□□ 0.65
CYLDQ9NQC7 HCG4P8-203ENST00000443049 980 ntBASIC19.11■□□□□ 0.65
CYLDQ9NQC7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 GPR32P1-201ENST00000601788 811 ntBASIC19.11■□□□□ 0.65
CYLDQ9NQC7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CYLDQ9NQC7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 CHCHD2P8-201ENST00000429873 447 ntBASIC19.1■□□□□ 0.65
CYLDQ9NQC7 KRT18P56-201ENST00000507275 550 ntBASIC19.1■□□□□ 0.65
CYLDQ9NQC7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYLDQ9NQC7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.09■□□□□ 0.65
CYLDQ9NQC7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYLDQ9NQC7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYLDQ9NQC7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.09■□□□□ 0.65
CYLDQ9NQC7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.09■□□□□ 0.65
CYLDQ9NQC7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYLDQ9NQC7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.09■□□□□ 0.65
CYLDQ9NQC7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.09■□□□□ 0.65
CYLDQ9NQC7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYLDQ9NQC7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.09■□□□□ 0.65
CYLDQ9NQC7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CYLDQ9NQC7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms