Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 MIR4751-201ENST00000578027 74 ntBASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 AL078644.1-201ENST00000609881 752 ntBASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 AD001527.2-201ENST00000622994 785 ntBASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 AL035633.1-201ENST00000406139 838 ntBASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 AC122714.2-201ENST00000502787 707 ntBASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 AC018845.2-201ENST00000568326 409 ntBASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 AL513190.1-201ENST00000621254 727 ntBASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 AC073130.3-201ENST00000624389 2278 ntBASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZFYVE28Q9HCC9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 SPDYE21P-201ENST00000413323 827 ntBASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 AC239800.4-201ENST00000603712 296 ntBASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 AC004706.3-202ENST00000621574 984 ntBASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.55■□□□□ 0.88
ZFYVE28Q9HCC9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZFYVE28Q9HCC9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZFYVE28Q9HCC9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ZFYVE28Q9HCC9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ZFYVE28Q9HCC9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.54■□□□□ 0.88
ZFYVE28Q9HCC9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZFYVE28Q9HCC9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZFYVE28Q9HCC9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
ZFYVE28Q9HCC9 AC244107.1-201ENST00000442033 332 ntBASIC20.54■□□□□ 0.88
ZFYVE28Q9HCC9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZFYVE28Q9HCC9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.54■□□□□ 0.88
ZFYVE28Q9HCC9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZFYVE28Q9HCC9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.54■□□□□ 0.88
ZFYVE28Q9HCC9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ZFYVE28Q9HCC9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 AL032819.2-201ENST00000624543 2162 ntBASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 HCG4B-203ENST00000450128 991 ntBASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 GPR89P-201ENST00000407924 1495 ntBASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms