Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 GMCL1P1-201ENST00000463439 1581 ntBASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 AC132008.2-207ENST00000454517 770 ntBASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 TP73-AS1-210ENST00000637775 1455 ntBASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.3■□□□□ 0.84
BCAS3Q9H6U6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 PHGDH-209ENST00000641074 1780 ntBASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 POM121L3P-201ENST00000419331 1163 ntBASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 AL591684.3-201ENST00000605187 298 ntBASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
BCAS3Q9H6U6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 LINC01711-201ENST00000598340 967 ntBASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 AL138831.2-201ENST00000606564 490 ntBASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS3Q9H6U6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 AC125634.1-201ENST00000438758 1403 ntBASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 SAPCD2P3-201ENST00000455031 850 ntBASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 AC008687.5-201ENST00000593746 558 ntBASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS3Q9H6U6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms