Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 AC124067.4-201ENST00000519691 2379 ntBASIC18.86■□□□□ 0.61
DDX47Q9H0S4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 LINC00602-201ENST00000629776 2065 ntBASIC18.86■□□□□ 0.61
DDX47Q9H0S4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 HOXB1-202ENST00000577092 1414 ntBASIC18.85■□□□□ 0.61
DDX47Q9H0S4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 DGCR10-201ENST00000609839 495 ntBASIC18.85■□□□□ 0.61
DDX47Q9H0S4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.85■□□□□ 0.61
DDX47Q9H0S4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 AL024508.2-201ENST00000607749 1894 ntBASIC18.84■□□□□ 0.61
DDX47Q9H0S4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 KRT18P23-201ENST00000435622 1283 ntBASIC18.84■□□□□ 0.61
DDX47Q9H0S4 CA15P1-201ENST00000481698 905 ntBASIC18.84■□□□□ 0.61
DDX47Q9H0S4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 CD177P1-201ENST00000606252 935 ntBASIC18.84■□□□□ 0.61
DDX47Q9H0S4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 AC100803.2-201ENST00000562459 1963 ntBASIC18.84■□□□□ 0.61
DDX47Q9H0S4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
DDX47Q9H0S4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DDX47Q9H0S4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDX47Q9H0S4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
DDX47Q9H0S4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDX47Q9H0S4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDX47Q9H0S4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDX47Q9H0S4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
DDX47Q9H0S4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDX47Q9H0S4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX47Q9H0S4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX47Q9H0S4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.83■□□□□ 0.6
DDX47Q9H0S4 AC097488.1-201ENST00000507834 756 ntBASIC18.83■□□□□ 0.6
DDX47Q9H0S4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.83■□□□□ 0.6
DDX47Q9H0S4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
DDX47Q9H0S4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.83■□□□□ 0.6
DDX47Q9H0S4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.83■□□□□ 0.6
DDX47Q9H0S4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms