Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 AF106564.1-201ENST00000607058 2553 ntBASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 Z98044.1-201ENST00000632503 1764 ntBASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
LRFN3Q9BTN0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 ADH5P3-201ENST00000433842 1137 ntBASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 AP001059.3-201ENST00000619053 235 ntBASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 AL133338.1-201ENST00000565695 1517 ntBASIC17.93■□□□□ 0.46
LRFN3Q9BTN0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 AC068587.10-201ENST00000641210 219 ntBASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN3Q9BTN0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 MIR1909-201ENST00000411312 80 ntBASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 OR7E47P-204ENST00000575924 449 ntBASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 AC026120.1-201ENST00000611536 926 ntBASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRFN3Q9BTN0 AD001527.2-201ENST00000622994 785 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms