Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 RPS2P55-201ENST00000397318 883 ntBASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 AC098590.1-201ENST00000468126 897 ntBASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 AC107956.1-201ENST00000494359 873 ntBASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HDHD3Q9BSH5 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 PRORSD1P-202ENST00000563365 2154 ntBASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 HOXB1-202ENST00000577092 1414 ntBASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 ABHD17AP1-201ENST00000358206 933 ntBASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 AL158047.1-201ENST00000445918 881 ntBASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 AP003041.3-201ENST00000527151 707 ntBASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 AC142381.4-202ENST00000563973 229 ntBASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 CR769767.2-201ENST00000622735 460 ntBASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDHD3Q9BSH5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 AL024508.2-201ENST00000607749 1894 ntBASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 SIRPAP1-201ENST00000448467 1770 ntBASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDHD3Q9BSH5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms