Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAAF1Q9BRP4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 KRT18P67-201ENST00000432816 1264 ntBASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.23■□□□□ 0.67
PAAF1Q9BRP4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 KRT8P47-201ENST00000604727 1398 ntBASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 AP001005.1-201ENST00000571755 1248 ntBASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 AL049840.3-201ENST00000602669 611 ntBASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 AL773604.1-201ENST00000617417 272 ntBASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PAAF1Q9BRP4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 AL096828.2-201ENST00000567259 1965 ntBASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 AL031284.1-201ENST00000419297 478 ntBASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 AC007967.3-201ENST00000434308 558 ntBASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 HNRNPDP1-201ENST00000439535 754 ntBASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 AC018712.1-201ENST00000455767 687 ntBASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 AP005117.1-201ENST00000584346 1413 ntBASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 AC120114.3-201ENST00000611923 658 ntBASIC19.21■□□□□ 0.67
PAAF1Q9BRP4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms