Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HAPLN3Q96S86 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HAPLN3Q96S86 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
HAPLN3Q96S86 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HAPLN3Q96S86 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 TSPY12P-201ENST00000421279 868 ntBASIC18.7■□□□□ 0.58
HAPLN3Q96S86 BX276092.5-203ENST00000456199 560 ntBASIC18.7■□□□□ 0.58
HAPLN3Q96S86 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 AL121672.3-201ENST00000608644 468 ntBASIC18.7■□□□□ 0.58
HAPLN3Q96S86 AC009154.2-201ENST00000621177 724 ntBASIC18.7■□□□□ 0.58
HAPLN3Q96S86 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HAPLN3Q96S86 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 FLJ13224-201ENST00000313737 1514 ntBASIC18.69■□□□□ 0.58
HAPLN3Q96S86 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HAPLN3Q96S86 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 GUSBP12-201ENST00000513727 720 ntBASIC18.68■□□□□ 0.58
HAPLN3Q96S86 AC090616.6-201ENST00000582640 721 ntBASIC18.68■□□□□ 0.58
HAPLN3Q96S86 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.68■□□□□ 0.58
HAPLN3Q96S86 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms