Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MTDHP3-201ENST00000594186 672 ntBASIC20.52■□□□□ 0.87
SYNGAP1Q96PV0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.52■□□□□ 0.87
SYNGAP1Q96PV0 AP001269.4-201ENST00000609611 512 ntBASIC20.52■□□□□ 0.87
SYNGAP1Q96PV0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SYNGAP1Q96PV0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
SYNGAP1Q96PV0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.52■□□□□ 0.87
SYNGAP1Q96PV0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 ANO7L1-203ENST00000602586 1720 ntBASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 FAM215A-202ENST00000632077 792 ntBASIC20.51■□□□□ 0.87
SYNGAP1Q96PV0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 AC125634.1-201ENST00000438758 1403 ntBASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 KRT18P13-201ENST00000400056 1290 ntBASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 AL049840.3-201ENST00000602669 611 ntBASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SYNGAP1Q96PV0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 LINC02084-201ENST00000606069 1096 ntBASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
SYNGAP1Q96PV0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 RPS2P28-201ENST00000314255 741 ntBASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.48■□□□□ 0.87
SYNGAP1Q96PV0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms