Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ALPK3Q96L96 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ALPK3Q96L96 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ALPK3Q96L96 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ALPK3Q96L96 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ALPK3Q96L96 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
ALPK3Q96L96 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ALPK3Q96L96 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ALPK3Q96L96 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.58■□□□□ 0.72
ALPK3Q96L96 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
ALPK3Q96L96 FAM86GP-201ENST00000448322 971 ntBASIC19.58■□□□□ 0.72
ALPK3Q96L96 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.58■□□□□ 0.72
ALPK3Q96L96 AL589182.2-201ENST00000619332 1049 ntBASIC19.58■□□□□ 0.72
ALPK3Q96L96 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ALPK3Q96L96 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ALPK3Q96L96 AC112907.3-201ENST00000577781 2400 ntBASIC19.58■□□□□ 0.72
ALPK3Q96L96 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
ALPK3Q96L96 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ALPK3Q96L96 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.58■□□□□ 0.72
ALPK3Q96L96 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ALPK3Q96L96 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ALPK3Q96L96 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.58■□□□□ 0.72
ALPK3Q96L96 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ALPK3Q96L96 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ALPK3Q96L96 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
ALPK3Q96L96 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ALPK3Q96L96 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALPK3Q96L96 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
ALPK3Q96L96 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.57■□□□□ 0.72
ALPK3Q96L96 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALPK3Q96L96 IGHV3-65-201ENST00000523210 341 ntBASIC19.57■□□□□ 0.72
ALPK3Q96L96 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALPK3Q96L96 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ALPK3Q96L96 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
ALPK3Q96L96 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.57■□□□□ 0.72
ALPK3Q96L96 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ALPK3Q96L96 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALPK3Q96L96 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.57■□□□□ 0.72
ALPK3Q96L96 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.57■□□□□ 0.72
ALPK3Q96L96 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.57■□□□□ 0.72
ALPK3Q96L96 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.57■□□□□ 0.72
ALPK3Q96L96 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.57■□□□□ 0.72
ALPK3Q96L96 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ALPK3Q96L96 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.57■□□□□ 0.72
ALPK3Q96L96 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ALPK3Q96L96 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.56■□□□□ 0.72
ALPK3Q96L96 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALPK3Q96L96 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALPK3Q96L96 AC125437.2-201ENST00000625180 2167 ntBASIC19.56■□□□□ 0.72
ALPK3Q96L96 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ALPK3Q96L96 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.56■□□□□ 0.72
ALPK3Q96L96 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
ALPK3Q96L96 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALPK3Q96L96 ACTG1P14-201ENST00000446382 1122 ntBASIC19.56■□□□□ 0.72
ALPK3Q96L96 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.56■□□□□ 0.72
ALPK3Q96L96 AC122714.2-201ENST00000502787 707 ntBASIC19.56■□□□□ 0.72
ALPK3Q96L96 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.56■□□□□ 0.72
ALPK3Q96L96 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.56■□□□□ 0.72
ALPK3Q96L96 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.56■□□□□ 0.72
ALPK3Q96L96 RN7SL204P-201ENST00000582831 262 ntBASIC19.56■□□□□ 0.72
ALPK3Q96L96 LINC00628-201ENST00000628516 1289 ntBASIC19.56■□□□□ 0.72
ALPK3Q96L96 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.56■□□□□ 0.72
ALPK3Q96L96 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALPK3Q96L96 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.56■□□□□ 0.72
ALPK3Q96L96 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALPK3Q96L96 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ALPK3Q96L96 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.56■□□□□ 0.72
ALPK3Q96L96 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.56■□□□□ 0.72
ALPK3Q96L96 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.56■□□□□ 0.72
ALPK3Q96L96 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 AC063926.2-201ENST00000623766 1308 ntBASIC19.55■□□□□ 0.72
ALPK3Q96L96 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALPK3Q96L96 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALPK3Q96L96 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALPK3Q96L96 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ALPK3Q96L96 AC105339.1-204ENST00000636249 355 ntBASIC19.55■□□□□ 0.72
ALPK3Q96L96 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALPK3Q96L96 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALPK3Q96L96 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ALPK3Q96L96 BCAR1-209ENST00000546196 1340 ntBASIC19.55■□□□□ 0.72
ALPK3Q96L96 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ALPK3Q96L96 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms