Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COX4I2Q96KJ9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COX4I2Q96KJ9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.84■□□□□ 0.29
COX4I2Q96KJ9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COX4I2Q96KJ9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COX4I2Q96KJ9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COX4I2Q96KJ9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COX4I2Q96KJ9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.84■□□□□ 0.29
COX4I2Q96KJ9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
COX4I2Q96KJ9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COX4I2Q96KJ9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 MIR1238-201ENST00000408483 83 ntBASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 NAPSB-206ENST00000562112 1266 ntBASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 NTF6B-201ENST00000591913 560 ntBASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 REXO1L10P-201ENST00000615707 1290 ntBASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 FER1L4-210ENST00000615531 5998 ntBASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COX4I2Q96KJ9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 AC073508.3-201ENST00000619697 1419 ntBASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 DUX4L26-201ENST00000489078 1255 ntBASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COX4I2Q96KJ9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 NBPF21P-201ENST00000425093 1451 ntBASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 UBALD1-205ENST00000590891 2641 ntBASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 AC087388.1-201ENST00000571370 1112 ntBASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.81■□□□□ 0.28
COX4I2Q96KJ9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms