Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM11Q96F44 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM11Q96F44 AL138966.2-201ENST00000621997 464 ntBASIC19.15■□□□□ 0.66
TRIM11Q96F44 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM11Q96F44 AC066615.1-201ENST00000640911 628 ntBASIC19.15■□□□□ 0.66
TRIM11Q96F44 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRIM11Q96F44 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 AC006116.8-202ENST00000587620 1550 ntBASIC19.15■□□□□ 0.66
TRIM11Q96F44 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM11Q96F44 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
TRIM11Q96F44 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM11Q96F44 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
TRIM11Q96F44 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
TRIM11Q96F44 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM11Q96F44 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.14■□□□□ 0.66
TRIM11Q96F44 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM11Q96F44 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM11Q96F44 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM11Q96F44 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRIM11Q96F44 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TRIM11Q96F44 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRIM11Q96F44 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TRIM11Q96F44 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM11Q96F44 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM11Q96F44 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM11Q96F44 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM11Q96F44 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM11Q96F44 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM11Q96F44 SLC25A3P1-201ENST00000443844 931 ntBASIC19.14■□□□□ 0.65
TRIM11Q96F44 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.14■□□□□ 0.65
TRIM11Q96F44 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM11Q96F44 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM11Q96F44 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRIM11Q96F44 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TRIM11Q96F44 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM11Q96F44 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM11Q96F44 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM11Q96F44 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM11Q96F44 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM11Q96F44 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM11Q96F44 AC132938.6-201ENST00000623828 1655 ntBASIC19.14■□□□□ 0.65
TRIM11Q96F44 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM11Q96F44 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM11Q96F44 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM11Q96F44 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM11Q96F44 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM11Q96F44 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRIM11Q96F44 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.13■□□□□ 0.65
TRIM11Q96F44 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM11Q96F44 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM11Q96F44 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM11Q96F44 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM11Q96F44 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM11Q96F44 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM11Q96F44 AC113404.2-201ENST00000507884 177 ntBASIC19.13■□□□□ 0.65
TRIM11Q96F44 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM11Q96F44 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM11Q96F44 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM11Q96F44 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM11Q96F44 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM11Q96F44 AL031432.5-201ENST00000641059 760 ntBASIC19.13■□□□□ 0.65
TRIM11Q96F44 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM11Q96F44 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM11Q96F44 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM11Q96F44 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM11Q96F44 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM11Q96F44 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM11Q96F44 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM11Q96F44 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM11Q96F44 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM11Q96F44 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM11Q96F44 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM11Q96F44 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM11Q96F44 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM11Q96F44 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM11Q96F44 LINC00896-202ENST00000609602 2128 ntBASIC19.12■□□□□ 0.65
TRIM11Q96F44 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TRIM11Q96F44 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM11Q96F44 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM11Q96F44 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRIM11Q96F44 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TRIM11Q96F44 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM11Q96F44 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM11Q96F44 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM11Q96F44 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TRIM11Q96F44 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms