Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
FOXRED1Q96CU9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
FOXRED1Q96CU9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.77■□□□□ 0.11
FOXRED1Q96CU9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
FOXRED1Q96CU9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FOXRED1Q96CU9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 B3GAT3P1-201ENST00000471720 806 ntBASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 MIR4497-201ENST00000583208 89 ntBASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 CD177P1-201ENST00000606252 935 ntBASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 AC113410.3-201ENST00000623366 203 ntBASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXRED1Q96CU9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 SNORA78-201ENST00000459373 127 ntBASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 AC011506.1-201ENST00000474329 610 ntBASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXRED1Q96CU9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 GPAT2P1-201ENST00000444924 1672 ntBASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 SDHAP2-201ENST00000455183 2001 ntBASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 AC009065.1-201ENST00000564055 1225 ntBASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 MIR3180-5-201ENST00000583743 153 ntBASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 AC093010.1-201ENST00000473625 1624 ntBASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 KRT8P7-201ENST00000533003 1432 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms