Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.98■□□□□ 0.47
CLDN23Q96B33 KRT8P47-201ENST00000604727 1398 ntBASIC17.98■□□□□ 0.47
CLDN23Q96B33 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN23Q96B33 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN23Q96B33 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN23Q96B33 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN23Q96B33 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CLDN23Q96B33 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN23Q96B33 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN23Q96B33 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN23Q96B33 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.98■□□□□ 0.47
CLDN23Q96B33 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CLDN23Q96B33 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLDN23Q96B33 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN23Q96B33 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN23Q96B33 AL161938.1-201ENST00000569833 2180 ntBASIC17.97■□□□□ 0.47
CLDN23Q96B33 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN23Q96B33 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN23Q96B33 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN23Q96B33 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CLDN23Q96B33 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN23Q96B33 AC010460.3-201ENST00000511359 1579 ntBASIC17.97■□□□□ 0.47
CLDN23Q96B33 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN23Q96B33 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN23Q96B33 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CLDN23Q96B33 MIR770-201ENST00000390219 98 ntBASIC17.97■□□□□ 0.47
CLDN23Q96B33 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.97■□□□□ 0.47
CLDN23Q96B33 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.97■□□□□ 0.47
CLDN23Q96B33 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLDN23Q96B33 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN23Q96B33 AL513190.1-201ENST00000621254 727 ntBASIC17.97■□□□□ 0.47
CLDN23Q96B33 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN23Q96B33 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CLDN23Q96B33 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CLDN23Q96B33 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN23Q96B33 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN23Q96B33 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CLDN23Q96B33 AC006504.4-201ENST00000592118 1568 ntBASIC17.96■□□□□ 0.47
CLDN23Q96B33 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN23Q96B33 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN23Q96B33 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLDN23Q96B33 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN23Q96B33 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN23Q96B33 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN23Q96B33 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
CLDN23Q96B33 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN23Q96B33 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN23Q96B33 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN23Q96B33 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN23Q96B33 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN23Q96B33 AC108073.2-201ENST00000464002 357 ntBASIC17.96■□□□□ 0.47
CLDN23Q96B33 IGHV3-65-201ENST00000523210 341 ntBASIC17.96■□□□□ 0.47
CLDN23Q96B33 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN23Q96B33 AC018845.2-201ENST00000568326 409 ntBASIC17.96■□□□□ 0.47
CLDN23Q96B33 AC008667.4-201ENST00000607370 168 ntBASIC17.96■□□□□ 0.47
CLDN23Q96B33 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN23Q96B33 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN23Q96B33 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN23Q96B33 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLDN23Q96B33 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN23Q96B33 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN23Q96B33 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN23Q96B33 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN23Q96B33 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN23Q96B33 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.96■□□□□ 0.46
CLDN23Q96B33 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.96■□□□□ 0.46
CLDN23Q96B33 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN23Q96B33 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN23Q96B33 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN23Q96B33 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLDN23Q96B33 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLDN23Q96B33 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN23Q96B33 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN23Q96B33 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN23Q96B33 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CLDN23Q96B33 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN23Q96B33 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN23Q96B33 ELK2BP-201ENST00000415014 1224 ntBASIC17.95■□□□□ 0.46
CLDN23Q96B33 CEND1P1-201ENST00000451006 455 ntBASIC17.95■□□□□ 0.46
CLDN23Q96B33 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN23Q96B33 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN23Q96B33 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN23Q96B33 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN23Q96B33 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN23Q96B33 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.95■□□□□ 0.46
CLDN23Q96B33 AL078644.1-201ENST00000609881 752 ntBASIC17.95■□□□□ 0.46
CLDN23Q96B33 AC073592.5-201ENST00000624854 528 ntBASIC17.95■□□□□ 0.46
CLDN23Q96B33 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN23Q96B33 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLDN23Q96B33 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN23Q96B33 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN23Q96B33 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN23Q96B33 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN23Q96B33 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN23Q96B33 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN23Q96B33 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN23Q96B33 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLDN23Q96B33 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLDN23Q96B33 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN23Q96B33 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms