Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC1Q92922 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC1Q92922 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC1Q92922 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC23.05■■□□□ 1.28
SMARCC1Q92922 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC23.05■■□□□ 1.28
SMARCC1Q92922 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC23.05■■□□□ 1.28
SMARCC1Q92922 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC1Q92922 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC23.05■■□□□ 1.28
SMARCC1Q92922 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC1Q92922 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC23.05■■□□□ 1.28
SMARCC1Q92922 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC1Q92922 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
SMARCC1Q92922 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC1Q92922 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC23.05■■□□□ 1.28
SMARCC1Q92922 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC1Q92922 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC1Q92922 AL499627.1-201ENST00000569373 2188 ntBASIC23.04■■□□□ 1.28
SMARCC1Q92922 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC1Q92922 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC1Q92922 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
SMARCC1Q92922 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
SMARCC1Q92922 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC1Q92922 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC1Q92922 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC1Q92922 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC1Q92922 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC1Q92922 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC23.04■■□□□ 1.28
SMARCC1Q92922 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SMARCC1Q92922 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
SMARCC1Q92922 METTL26-205ENST00000397666 726 ntTSL 2 BASIC23.04■■□□□ 1.28
SMARCC1Q92922 KRT18P2-201ENST00000447938 1258 ntBASIC23.04■■□□□ 1.28
SMARCC1Q92922 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC23.04■■□□□ 1.28
SMARCC1Q92922 YBX1P5-201ENST00000509441 847 ntBASIC23.04■■□□□ 1.28
SMARCC1Q92922 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SMARCC1Q92922 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC23.04■■□□□ 1.28
SMARCC1Q92922 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC1Q92922 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC23.04■■□□□ 1.28
SMARCC1Q92922 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SMARCC1Q92922 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC1Q92922 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC1Q92922 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC1Q92922 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SMARCC1Q92922 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC1Q92922 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SMARCC1Q92922 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.03■■□□□ 1.28
SMARCC1Q92922 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC1Q92922 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC1Q92922 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC23.03■■□□□ 1.28
SMARCC1Q92922 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC23.03■■□□□ 1.28
SMARCC1Q92922 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC1Q92922 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC1Q92922 SPDYE21P-201ENST00000413323 827 ntBASIC23.03■■□□□ 1.28
SMARCC1Q92922 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC23.03■■□□□ 1.28
SMARCC1Q92922 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC23.03■■□□□ 1.28
SMARCC1Q92922 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SMARCC1Q92922 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC23.03■■□□□ 1.28
SMARCC1Q92922 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
SMARCC1Q92922 TCAP-202ENST00000578283 583 ntTSL 5 BASIC23.03■■□□□ 1.28
SMARCC1Q92922 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
SMARCC1Q92922 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC23.03■■□□□ 1.28
SMARCC1Q92922 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC23.03■■□□□ 1.28
SMARCC1Q92922 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC1Q92922 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
SMARCC1Q92922 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.02■■□□□ 1.28
SMARCC1Q92922 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCC1Q92922 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCC1Q92922 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCC1Q92922 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC23.02■■□□□ 1.28
SMARCC1Q92922 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
SMARCC1Q92922 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC23.02■■□□□ 1.28
SMARCC1Q92922 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC23.02■■□□□ 1.28
SMARCC1Q92922 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC23.02■■□□□ 1.28
SMARCC1Q92922 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
SMARCC1Q92922 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC23.02■■□□□ 1.28
SMARCC1Q92922 AL596442.2-201ENST00000610240 980 ntBASIC23.02■■□□□ 1.28
SMARCC1Q92922 AL589182.2-201ENST00000619332 1049 ntBASIC23.02■■□□□ 1.28
SMARCC1Q92922 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
SMARCC1Q92922 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SMARCC1Q92922 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCC1Q92922 AC002310.6-201ENST00000624451 1377 ntBASIC23.01■■□□□ 1.27
SMARCC1Q92922 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
SMARCC1Q92922 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC1Q92922 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC1Q92922 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC1Q92922 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC1Q92922 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC23.01■■□□□ 1.27
SMARCC1Q92922 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC1Q92922 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC1Q92922 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC23.01■■□□□ 1.27
SMARCC1Q92922 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC1Q92922 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC23.01■■□□□ 1.27
SMARCC1Q92922 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
SMARCC1Q92922 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC1Q92922 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
SMARCC1Q92922 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC1Q92922 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC1Q92922 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC23■■□□□ 1.27
SMARCC1Q92922 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23■■□□□ 1.27
SMARCC1Q92922 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23■■□□□ 1.27
SMARCC1Q92922 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms