Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB3Q92617 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB3Q92617 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB3Q92617 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB3Q92617 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 PRORSD1P-201ENST00000295112 541 ntBASIC14.3□□□□□ -0.12
NPIPB3Q92617 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB3Q92617 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 UBE2SP1-201ENST00000450587 669 ntBASIC14.3□□□□□ -0.12
NPIPB3Q92617 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB3Q92617 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 AL049637.2-201ENST00000641778 930 ntBASIC14.3□□□□□ -0.12
NPIPB3Q92617 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB3Q92617 KRT8P7-201ENST00000533003 1432 ntBASIC14.3□□□□□ -0.12
NPIPB3Q92617 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB3Q92617 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB3Q92617 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB3Q92617 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB3Q92617 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB3Q92617 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB3Q92617 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPB3Q92617 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NPIPB3Q92617 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NPIPB3Q92617 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB3Q92617 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NPIPB3Q92617 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
NPIPB3Q92617 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB3Q92617 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NPIPB3Q92617 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB3Q92617 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB3Q92617 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB3Q92617 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB3Q92617 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.29□□□□□ -0.12
NPIPB3Q92617 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NPIPB3Q92617 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NPIPB3Q92617 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB3Q92617 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB3Q92617 AC012618.2-201ENST00000428058 849 ntBASIC14.29□□□□□ -0.12
NPIPB3Q92617 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB3Q92617 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB3Q92617 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPB3Q92617 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.29□□□□□ -0.12
NPIPB3Q92617 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPB3Q92617 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NPIPB3Q92617 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB3Q92617 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB3Q92617 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB3Q92617 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPB3Q92617 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB3Q92617 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB3Q92617 CROCCP1-201ENST00000426910 5675 ntBASIC14.29□□□□□ -0.12
NPIPB3Q92617 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB3Q92617 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPB3Q92617 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NPIPB3Q92617 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NPIPB3Q92617 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NPIPB3Q92617 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB3Q92617 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB3Q92617 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB3Q92617 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB3Q92617 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NPIPB3Q92617 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB3Q92617 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NPIPB3Q92617 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB3Q92617 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB3Q92617 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NPIPB3Q92617 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.28□□□□□ -0.12
NPIPB3Q92617 AC093010.1-201ENST00000473625 1624 ntBASIC14.28□□□□□ -0.12
NPIPB3Q92617 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB3Q92617 AP003041.3-201ENST00000527151 707 ntBASIC14.28□□□□□ -0.12
NPIPB3Q92617 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB3Q92617 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB3Q92617 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.28□□□□□ -0.12
NPIPB3Q92617 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB3Q92617 AC233702.5-201ENST00000584107 538 ntBASIC14.28□□□□□ -0.12
NPIPB3Q92617 AC012313.1-201ENST00000593393 3059 ntBASIC14.28□□□□□ -0.12
NPIPB3Q92617 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB3Q92617 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB3Q92617 AC026471.5-201ENST00000615068 467 ntBASIC14.28□□□□□ -0.12
NPIPB3Q92617 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.28□□□□□ -0.12
NPIPB3Q92617 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NPIPB3Q92617 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB3Q92617 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB3Q92617 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB3Q92617 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms