Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CNOT9Q92600 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.69■□□□□ 0.26
CNOT9Q92600 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
CNOT9Q92600 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.69■□□□□ 0.26
CNOT9Q92600 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.69■□□□□ 0.26
CNOT9Q92600 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.69■□□□□ 0.26
CNOT9Q92600 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.69■□□□□ 0.26
CNOT9Q92600 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CNOT9Q92600 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
CNOT9Q92600 AC140113.3-201ENST00000605663 199 ntBASIC16.69■□□□□ 0.26
CNOT9Q92600 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.69■□□□□ 0.26
CNOT9Q92600 AC005363.2-201ENST00000618631 242 ntBASIC16.69■□□□□ 0.26
CNOT9Q92600 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CNOT9Q92600 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CNOT9Q92600 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CNOT9Q92600 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CNOT9Q92600 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CNOT9Q92600 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CNOT9Q92600 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CNOT9Q92600 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT9Q92600 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT9Q92600 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT9Q92600 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT9Q92600 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT9Q92600 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT9Q92600 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT9Q92600 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.68■□□□□ 0.26
CNOT9Q92600 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT9Q92600 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CNOT9Q92600 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.68■□□□□ 0.26
CNOT9Q92600 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.68■□□□□ 0.26
CNOT9Q92600 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CNOT9Q92600 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.68■□□□□ 0.26
CNOT9Q92600 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.68■□□□□ 0.26
CNOT9Q92600 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT9Q92600 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.68■□□□□ 0.26
CNOT9Q92600 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT9Q92600 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CNOT9Q92600 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CNOT9Q92600 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT9Q92600 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT9Q92600 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CNOT9Q92600 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNOT9Q92600 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT9Q92600 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.67■□□□□ 0.26
CNOT9Q92600 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.67■□□□□ 0.26
CNOT9Q92600 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.67■□□□□ 0.26
CNOT9Q92600 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT9Q92600 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT9Q92600 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT9Q92600 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT9Q92600 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT9Q92600 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT9Q92600 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CNOT9Q92600 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT9Q92600 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT9Q92600 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.67■□□□□ 0.26
CNOT9Q92600 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.67■□□□□ 0.26
CNOT9Q92600 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
CNOT9Q92600 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT9Q92600 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CNOT9Q92600 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CNOT9Q92600 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT9Q92600 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT9Q92600 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CNOT9Q92600 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CNOT9Q92600 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT9Q92600 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT9Q92600 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.67■□□□□ 0.26
CNOT9Q92600 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CNOT9Q92600 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.67■□□□□ 0.26
CNOT9Q92600 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.67■□□□□ 0.26
CNOT9Q92600 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CNOT9Q92600 TERF1P1-201ENST00000311003 1181 ntBASIC16.67■□□□□ 0.26
CNOT9Q92600 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.67■□□□□ 0.26
CNOT9Q92600 AC113347.1-201ENST00000413321 391 ntBASIC16.67■□□□□ 0.26
CNOT9Q92600 AC211429.1-201ENST00000415277 523 ntBASIC16.67■□□□□ 0.26
CNOT9Q92600 AL137013.1-201ENST00000432946 1228 ntBASIC16.67■□□□□ 0.26
CNOT9Q92600 PVRIG2P-201ENST00000435460 978 ntBASIC16.67■□□□□ 0.26
CNOT9Q92600 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.67■□□□□ 0.26
CNOT9Q92600 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNOT9Q92600 COX11P1-201ENST00000489116 835 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms