Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S1Q92572 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
AP3S1Q92572 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
AP3S1Q92572 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.96■□□□□ 0.15
AP3S1Q92572 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.96■□□□□ 0.15
AP3S1Q92572 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.96■□□□□ 0.15
AP3S1Q92572 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S1Q92572 AC092437.1-201ENST00000624794 1048 ntBASIC15.96■□□□□ 0.15
AP3S1Q92572 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S1Q92572 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S1Q92572 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S1Q92572 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.96■□□□□ 0.15
AP3S1Q92572 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP3S1Q92572 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP3S1Q92572 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP3S1Q92572 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
AP3S1Q92572 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP3S1Q92572 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
AP3S1Q92572 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.96■□□□□ 0.14
AP3S1Q92572 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.14
AP3S1Q92572 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP3S1Q92572 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
AP3S1Q92572 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
AP3S1Q92572 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
AP3S1Q92572 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
AP3S1Q92572 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.95■□□□□ 0.14
AP3S1Q92572 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
AP3S1Q92572 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3S1Q92572 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
AP3S1Q92572 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
AP3S1Q92572 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
AP3S1Q92572 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
AP3S1Q92572 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3S1Q92572 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.95■□□□□ 0.14
AP3S1Q92572 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3S1Q92572 AC011767.1-201ENST00000617410 1153 ntBASIC15.95■□□□□ 0.14
AP3S1Q92572 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3S1Q92572 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
AP3S1Q92572 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
AP3S1Q92572 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
AP3S1Q92572 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.95■□□□□ 0.14
AP3S1Q92572 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
AP3S1Q92572 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
AP3S1Q92572 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.95■□□□□ 0.14
AP3S1Q92572 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S1Q92572 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
AP3S1Q92572 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S1Q92572 PCDHB19P-201ENST00000570871 2371 ntBASIC15.94■□□□□ 0.14
AP3S1Q92572 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S1Q92572 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
AP3S1Q92572 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S1Q92572 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S1Q92572 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S1Q92572 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S1Q92572 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S1Q92572 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S1Q92572 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S1Q92572 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.94■□□□□ 0.14
AP3S1Q92572 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S1Q92572 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.94■□□□□ 0.14
AP3S1Q92572 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S1Q92572 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S1Q92572 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.94■□□□□ 0.14
AP3S1Q92572 POU5F1P3-201ENST00000428824 1078 ntBASIC15.94■□□□□ 0.14
AP3S1Q92572 PRSS44-201ENST00000515154 1146 ntBASIC15.94■□□□□ 0.14
AP3S1Q92572 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.94■□□□□ 0.14
AP3S1Q92572 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.94■□□□□ 0.14
AP3S1Q92572 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.94■□□□□ 0.14
AP3S1Q92572 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.94■□□□□ 0.14
AP3S1Q92572 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.94■□□□□ 0.14
AP3S1Q92572 AC005837.3-201ENST00000612163 286 ntBASIC15.94■□□□□ 0.14
AP3S1Q92572 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
AP3S1Q92572 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S1Q92572 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S1Q92572 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S1Q92572 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms