Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 AD000864.1-201ENST00000624076 2295 ntBASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 AC233702.5-201ENST00000584107 538 ntBASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 AP001412.1-201ENST00000608405 714 ntBASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 AL049637.2-201ENST00000641778 930 ntBASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 AC092338.2-201ENST00000568827 1415 ntBASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SLC44A1Q8WWI5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 AL355355.2-201ENST00000442321 338 ntBASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms