Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2AF1L4Q8WU68 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 AP001269.4-201ENST00000609611 512 ntBASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2AF1L4Q8WU68 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
U2AF1L4Q8WU68 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.64■□□□□ 0.9
U2AF1L4Q8WU68 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
U2AF1L4Q8WU68 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
U2AF1L4Q8WU68 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
U2AF1L4Q8WU68 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
U2AF1L4Q8WU68 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.64■□□□□ 0.9
U2AF1L4Q8WU68 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
U2AF1L4Q8WU68 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
U2AF1L4Q8WU68 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
U2AF1L4Q8WU68 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 Z83851.2-201ENST00000609564 659 ntBASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
U2AF1L4Q8WU68 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 DNAJB3-202ENST00000449667 1266 ntBASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 AC092910.1-201ENST00000482027 1129 ntBASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 AC021087.4-201ENST00000563761 564 ntBASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 HLA-J-201ENST00000462773 1622 ntBASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 AC020763.4-201ENST00000623414 4170 ntBASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
U2AF1L4Q8WU68 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
U2AF1L4Q8WU68 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms