Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.29■□□□□ 0.2
FNDC9Q8TBE3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC9Q8TBE3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
FNDC9Q8TBE3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC9Q8TBE3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC9Q8TBE3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC9Q8TBE3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC9Q8TBE3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC9Q8TBE3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.29■□□□□ 0.2
FNDC9Q8TBE3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
FNDC9Q8TBE3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.29■□□□□ 0.2
FNDC9Q8TBE3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
FNDC9Q8TBE3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 PKD1P1-201ENST00000458669 6805 ntBASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 AP002383.4-201ENST00000442518 975 ntBASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 AP002414.4-201ENST00000589764 1148 ntBASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 AC008687.5-201ENST00000593746 558 ntBASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC9Q8TBE3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 AL353692.3-201ENST00000407031 1396 ntBASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 KRT18P1-202ENST00000452408 1331 ntBASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 AC092329.2-201ENST00000598402 547 ntBASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 AC004263.2-201ENST00000617183 678 ntBASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.27■□□□□ 0.2
FNDC9Q8TBE3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.27■□□□□ 0.19
FNDC9Q8TBE3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FNDC9Q8TBE3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FNDC9Q8TBE3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FNDC9Q8TBE3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
FNDC9Q8TBE3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
FNDC9Q8TBE3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FNDC9Q8TBE3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FNDC9Q8TBE3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.27■□□□□ 0.19
FNDC9Q8TBE3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
FNDC9Q8TBE3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FNDC9Q8TBE3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FNDC9Q8TBE3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.26■□□□□ 0.19
FNDC9Q8TBE3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms