Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.84■□□□□ 0.13
CPEB3Q8NE35 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 AC024563.2-201ENST00000603282 481 ntBASIC15.84■□□□□ 0.13
CPEB3Q8NE35 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPEB3Q8NE35 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CPEB3Q8NE35 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CPEB3Q8NE35 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CPEB3Q8NE35 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CPEB3Q8NE35 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.83■□□□□ 0.13
CPEB3Q8NE35 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CPEB3Q8NE35 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.83■□□□□ 0.13
CPEB3Q8NE35 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.83■□□□□ 0.13
CPEB3Q8NE35 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 AL671277.2-201ENST00000458060 996 ntBASIC15.83■□□□□ 0.12
CPEB3Q8NE35 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 AC083849.1-201ENST00000615227 514 ntBASIC15.83■□□□□ 0.12
CPEB3Q8NE35 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPEB3Q8NE35 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.82■□□□□ 0.12
CPEB3Q8NE35 SPDYE13P-201ENST00000445314 798 ntBASIC15.82■□□□□ 0.12
CPEB3Q8NE35 VENTXP5-201ENST00000523979 775 ntBASIC15.82■□□□□ 0.12
CPEB3Q8NE35 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 NTF6B-201ENST00000591913 560 ntBASIC15.82■□□□□ 0.12
CPEB3Q8NE35 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 AC093010.1-201ENST00000473625 1624 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms