Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC17A8Q8NDX2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC17A8Q8NDX2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC17A8Q8NDX2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC17A8Q8NDX2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC17A8Q8NDX2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC17A8Q8NDX2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 METTL21AP1-201ENST00000438852 635 ntBASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 AC245100.3-201ENST00000441281 285 ntBASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC17A8Q8NDX2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 DNAJB3-202ENST00000449667 1266 ntBASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 AC126763.1-201ENST00000552015 2118 ntBASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC17A8Q8NDX2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 AF238378.1-201ENST00000526806 358 ntBASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 AC008687.5-201ENST00000593746 558 ntBASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC17A8Q8NDX2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC17A8Q8NDX2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC17A8Q8NDX2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC17A8Q8NDX2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC17A8Q8NDX2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC17A8Q8NDX2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC17A8Q8NDX2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC17A8Q8NDX2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms