Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 AC090616.6-201ENST00000582640 721 ntBASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 AP002383.4-201ENST00000442518 975 ntBASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 AC004263.2-201ENST00000617183 678 ntBASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 GMCL1P1-201ENST00000463439 1581 ntBASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDH20Q8N6Y1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PCDH20Q8N6Y1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.46■□□□□ 0.54
PCDH20Q8N6Y1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 BICD1-207ENST00000551848 1962 ntBASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 LINC01126-201ENST00000623515 1646 ntBASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH20Q8N6Y1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 GUSBP12-201ENST00000513727 720 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms