Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 MIR3652-201ENST00000579335 131 ntBASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 REXO1L9P-201ENST00000604264 2108 ntBASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 AL138831.2-201ENST00000606564 490 ntBASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 AC135050.7-201ENST00000624508 2218 ntBASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ARHGEF39Q8N4T4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 KRT8P47-201ENST00000604727 1398 ntBASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 NSUN5P1-202ENST00000421140 1535 ntBASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 NSUN5P2-203ENST00000457352 1529 ntBASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 AC125634.1-201ENST00000438758 1403 ntBASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ARHGEF39Q8N4T4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 ABALON-201ENST00000629058 1903 ntBASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 AC074051.2-201ENST00000565115 352 ntBASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 BNIP3P18-201ENST00000593976 575 ntBASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF39Q8N4T4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ARHGEF39Q8N4T4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.02■□□□□ 0.31
ARHGEF39Q8N4T4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms