Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC026271.3-201ENST00000571884 352 ntBASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 AC244517.3-201ENST00000616254 1235 ntBASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 AL589935.2-201ENST00000616471 1231 ntBASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 AC133561.5-201ENST00000635547 218 ntBASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 AL645608.8-201ENST00000606034 2086 ntBASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 ECEL1P3-201ENST00000427961 737 ntBASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
DEPDC4Q8N2C3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 REXO1L10P-201ENST00000615707 1290 ntBASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DEPDC4Q8N2C3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DEPDC4Q8N2C3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DEPDC4Q8N2C3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.84■□□□□ 0.29
DEPDC4Q8N2C3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DEPDC4Q8N2C3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
DEPDC4Q8N2C3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.84■□□□□ 0.29
DEPDC4Q8N2C3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
DEPDC4Q8N2C3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.84■□□□□ 0.29
DEPDC4Q8N2C3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DEPDC4Q8N2C3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DEPDC4Q8N2C3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
DEPDC4Q8N2C3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DEPDC4Q8N2C3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DEPDC4Q8N2C3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms