Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 AC020916.1-201ENST00000587762 1774 ntBASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 GCNT6-201ENST00000379591 934 ntBASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 AL162253.1-201ENST00000443792 758 ntTSL 3 BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 TYW3-205ENST00000479111 1130 ntTSL 3 BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 CA15P1-201ENST00000481698 905 ntBASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 ADAL-204ENST00000562188 1228 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 BCL2-203ENST00000589955 5011 ntBASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00528Q8N1L1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC12.02□□□□□ -0.48
LINC00528Q8N1L1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.48
LINC00528Q8N1L1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00528Q8N1L1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00528Q8N1L1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00528Q8N1L1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00528Q8N1L1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
LINC00528Q8N1L1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00528Q8N1L1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
LINC00528Q8N1L1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC12.02□□□□□ -0.48
LINC00528Q8N1L1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC12.02□□□□□ -0.48
LINC00528Q8N1L1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
LINC00528Q8N1L1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00528Q8N1L1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00528Q8N1L1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 SNORA40.4-201ENST00000390971 128 ntBASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 AP000523.1-201ENST00000398242 1049 ntBASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 TRIM60P13-201ENST00000432350 1283 ntBASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 TPM4P1-201ENST00000436100 807 ntBASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 HCG4P8-203ENST00000443049 980 ntBASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 FAM86EP-206ENST00000510506 987 ntBASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 AL441883.1-201ENST00000566170 1045 ntBASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 AC018754.1-201ENST00000607486 925 ntBASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 AL359742.1-201ENST00000622497 540 ntBASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 SDHAP1-207ENST00000440850 2000 ntBASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 AC008040.1-204ENST00000469301 1738 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 AC104417.2-201ENST00000562989 1793 ntBASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00528Q8N1L1 AC068880.1-201ENST00000507289 2297 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms