Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 LINC01238-205ENST00000567549 1107 ntBASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 AL590326.2-201ENST00000625139 305 ntBASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 LINC00167-201ENST00000530583 1419 ntBASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 MIR662-201ENST00000384847 95 ntBASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 KRT18P48-201ENST00000434763 852 ntBASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 AC067852.2-201ENST00000590513 2313 ntBASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP4Q86YS3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 ARMC10P1-201ENST00000313754 855 ntBASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.21■□□□□ 0.99
RAB11FIP4Q86YS3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 AL645929.1-201ENST00000420084 975 ntBASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 AP003733.1-201ENST00000491725 852 ntBASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB11FIP4Q86YS3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms