Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC28Q86X40 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRC28Q86X40 AC008040.2-201ENST00000461049 708 ntBASIC16.13■□□□□ 0.17
LRRC28Q86X40 AC091390.4-202ENST00000476426 537 ntBASIC16.13■□□□□ 0.17
LRRC28Q86X40 AC097488.1-201ENST00000507834 756 ntBASIC16.13■□□□□ 0.17
LRRC28Q86X40 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC28Q86X40 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.13■□□□□ 0.17
LRRC28Q86X40 AC133561.5-201ENST00000635547 218 ntBASIC16.13■□□□□ 0.17
LRRC28Q86X40 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC28Q86X40 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
LRRC28Q86X40 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC28Q86X40 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LRRC28Q86X40 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC28Q86X40 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRRC28Q86X40 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC28Q86X40 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LRRC28Q86X40 AC008556.1-201ENST00000610908 2040 ntBASIC16.12■□□□□ 0.17
LRRC28Q86X40 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC28Q86X40 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
LRRC28Q86X40 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LRRC28Q86X40 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC28Q86X40 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LRRC28Q86X40 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC28Q86X40 ECEL1P3-201ENST00000427961 737 ntBASIC16.12■□□□□ 0.17
LRRC28Q86X40 TSPY23P-201ENST00000440136 739 ntBASIC16.12■□□□□ 0.17
LRRC28Q86X40 FAM207BP-201ENST00000447172 505 ntBASIC16.12■□□□□ 0.17
LRRC28Q86X40 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC28Q86X40 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRC28Q86X40 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRC28Q86X40 AP005242.2-201ENST00000580065 1175 ntBASIC16.12■□□□□ 0.17
LRRC28Q86X40 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
LRRC28Q86X40 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRC28Q86X40 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC28Q86X40 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC28Q86X40 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LRRC28Q86X40 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
LRRC28Q86X40 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRC28Q86X40 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC28Q86X40 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC28Q86X40 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC28Q86X40 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC28Q86X40 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.11■□□□□ 0.17
LRRC28Q86X40 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC28Q86X40 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC28Q86X40 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC28Q86X40 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC28Q86X40 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LRRC28Q86X40 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC28Q86X40 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC28Q86X40 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC28Q86X40 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC28Q86X40 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRC28Q86X40 SLC25A1P4-201ENST00000567977 778 ntBASIC16.11■□□□□ 0.17
LRRC28Q86X40 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC28Q86X40 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC28Q86X40 AC097493.4-201ENST00000641197 219 ntBASIC16.11■□□□□ 0.17
LRRC28Q86X40 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC28Q86X40 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC28Q86X40 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC28Q86X40 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC28Q86X40 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC28Q86X40 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC28Q86X40 PP12613-201ENST00000424958 2230 ntBASIC16.11■□□□□ 0.17
LRRC28Q86X40 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LRRC28Q86X40 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC28Q86X40 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LRRC28Q86X40 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC28Q86X40 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRRC28Q86X40 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC28Q86X40 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC28Q86X40 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms