Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.39■□□□□ 0.21
SHFQ7M4L6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHFQ7M4L6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
SHFQ7M4L6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SHFQ7M4L6 AC006116.8-202ENST00000587620 1550 ntBASIC16.38■□□□□ 0.21
SHFQ7M4L6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.38■□□□□ 0.21
SHFQ7M4L6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SHFQ7M4L6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 AC084018.2-201ENST00000613093 2607 ntBASIC16.38■□□□□ 0.21
SHFQ7M4L6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SHFQ7M4L6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.38■□□□□ 0.21
SHFQ7M4L6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.38■□□□□ 0.21
SHFQ7M4L6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 MESTP1-201ENST00000404287 994 ntBASIC16.38■□□□□ 0.21
SHFQ7M4L6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.38■□□□□ 0.21
SHFQ7M4L6 MCCD1P1-208ENST00000445732 328 ntBASIC16.38■□□□□ 0.21
SHFQ7M4L6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.38■□□□□ 0.21
SHFQ7M4L6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.38■□□□□ 0.21
SHFQ7M4L6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.38■□□□□ 0.21
SHFQ7M4L6 ITM2C-210ENST00000620962 501 ntBASIC16.38■□□□□ 0.21
SHFQ7M4L6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SHFQ7M4L6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.38■□□□□ 0.21
SHFQ7M4L6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.38■□□□□ 0.21
SHFQ7M4L6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.38■□□□□ 0.21
SHFQ7M4L6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SHFQ7M4L6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SHFQ7M4L6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHFQ7M4L6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHFQ7M4L6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHFQ7M4L6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHFQ7M4L6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHFQ7M4L6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHFQ7M4L6 GPAT2P1-201ENST00000444924 1672 ntBASIC16.37■□□□□ 0.21
SHFQ7M4L6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHFQ7M4L6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHFQ7M4L6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHFQ7M4L6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHFQ7M4L6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHFQ7M4L6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHFQ7M4L6 KRT18P29-201ENST00000397031 1267 ntBASIC16.37■□□□□ 0.21
SHFQ7M4L6 AL023284.2-201ENST00000405850 579 ntBASIC16.37■□□□□ 0.21
SHFQ7M4L6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHFQ7M4L6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHFQ7M4L6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 AP001412.1-201ENST00000608405 714 ntBASIC16.37■□□□□ 0.21
SHFQ7M4L6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHFQ7M4L6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHFQ7M4L6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHFQ7M4L6 AC034236.2-201ENST00000606662 1610 ntBASIC16.37■□□□□ 0.21
SHFQ7M4L6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
SHFQ7M4L6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHFQ7M4L6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHFQ7M4L6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHFQ7M4L6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHFQ7M4L6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.36■□□□□ 0.21
SHFQ7M4L6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms