Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS1Q6VY07 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.3■□□□□ 0.52
PACS1Q6VY07 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS1Q6VY07 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PACS1Q6VY07 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS1Q6VY07 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS1Q6VY07 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.3■□□□□ 0.52
PACS1Q6VY07 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.3■□□□□ 0.52
PACS1Q6VY07 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PACS1Q6VY07 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PACS1Q6VY07 LIN28AP1-201ENST00000429574 405 ntBASIC18.3■□□□□ 0.52
PACS1Q6VY07 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.3■□□□□ 0.52
PACS1Q6VY07 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.3■□□□□ 0.52
PACS1Q6VY07 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.3■□□□□ 0.52
PACS1Q6VY07 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PACS1Q6VY07 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PACS1Q6VY07 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PACS1Q6VY07 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.3■□□□□ 0.52
PACS1Q6VY07 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.3■□□□□ 0.52
PACS1Q6VY07 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS1Q6VY07 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PACS1Q6VY07 AC073508.3-201ENST00000619697 1419 ntBASIC18.3■□□□□ 0.52
PACS1Q6VY07 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PACS1Q6VY07 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.3■□□□□ 0.52
PACS1Q6VY07 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PACS1Q6VY07 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS1Q6VY07 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS1Q6VY07 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PACS1Q6VY07 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS1Q6VY07 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.3■□□□□ 0.52
PACS1Q6VY07 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PACS1Q6VY07 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.29■□□□□ 0.52
PACS1Q6VY07 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PACS1Q6VY07 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.29■□□□□ 0.52
PACS1Q6VY07 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PACS1Q6VY07 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.29■□□□□ 0.52
PACS1Q6VY07 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.29■□□□□ 0.52
PACS1Q6VY07 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PACS1Q6VY07 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
PACS1Q6VY07 SEC1P-202ENST00000473944 940 ntBASIC18.29■□□□□ 0.52
PACS1Q6VY07 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PACS1Q6VY07 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PACS1Q6VY07 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PACS1Q6VY07 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PACS1Q6VY07 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PACS1Q6VY07 AC093010.1-201ENST00000473625 1624 ntBASIC18.29■□□□□ 0.52
PACS1Q6VY07 BCL2-203ENST00000589955 5011 ntBASIC18.29■□□□□ 0.52
PACS1Q6VY07 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PACS1Q6VY07 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
PACS1Q6VY07 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PACS1Q6VY07 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PACS1Q6VY07 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.29■□□□□ 0.52
PACS1Q6VY07 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PACS1Q6VY07 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PACS1Q6VY07 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PACS1Q6VY07 AC012317.2-201ENST00000623305 2251 ntBASIC18.28■□□□□ 0.52
PACS1Q6VY07 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PACS1Q6VY07 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PACS1Q6VY07 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PACS1Q6VY07 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PACS1Q6VY07 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 AL137013.1-201ENST00000432946 1228 ntBASIC18.28■□□□□ 0.52
PACS1Q6VY07 ATP5G1P1-201ENST00000448724 379 ntBASIC18.28■□□□□ 0.52
PACS1Q6VY07 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 AC009065.1-201ENST00000564055 1225 ntBASIC18.28■□□□□ 0.52
PACS1Q6VY07 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PACS1Q6VY07 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PACS1Q6VY07 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PACS1Q6VY07 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PACS1Q6VY07 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PACS1Q6VY07 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PACS1Q6VY07 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PACS1Q6VY07 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PACS1Q6VY07 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.28■□□□□ 0.52
PACS1Q6VY07 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PACS1Q6VY07 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.27■□□□□ 0.52
PACS1Q6VY07 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PACS1Q6VY07 AC011270.2-201ENST00000624293 2550 ntBASIC18.27■□□□□ 0.52
PACS1Q6VY07 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PACS1Q6VY07 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PACS1Q6VY07 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.27■□□□□ 0.52
PACS1Q6VY07 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.27■□□□□ 0.52
PACS1Q6VY07 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.27■□□□□ 0.52
PACS1Q6VY07 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms