Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXR1Q6PIV2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FOXR1Q6PIV2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
FOXR1Q6PIV2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
FOXR1Q6PIV2 AC090340.1-201ENST00000620778 4980 ntBASIC18.89■□□□□ 0.62
FOXR1Q6PIV2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 AL031985.4-201ENST00000642138 673 ntBASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 AP006587.1-201ENST00000534129 1502 ntBASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 FLJ38576-201ENST00000623820 2459 ntBASIC18.89■□□□□ 0.61
FOXR1Q6PIV2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXR1Q6PIV2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 DUX4L26-201ENST00000489078 1255 ntBASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXR1Q6PIV2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 AC104076.2-201ENST00000448912 469 ntBASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXR1Q6PIV2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms