Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.44■■□□□ 1.02
CTR9Q6PD62 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CTR9Q6PD62 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTR9Q6PD62 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTR9Q6PD62 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
CTR9Q6PD62 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
CTR9Q6PD62 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.44■■□□□ 1.02
CTR9Q6PD62 AC099336.1-202ENST00000602961 463 ntBASIC21.44■■□□□ 1.02
CTR9Q6PD62 AL121894.2-201ENST00000602977 491 ntBASIC21.44■■□□□ 1.02
CTR9Q6PD62 AL732292.2-201ENST00000609649 430 ntBASIC21.44■■□□□ 1.02
CTR9Q6PD62 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTR9Q6PD62 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CTR9Q6PD62 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.44■■□□□ 1.02
CTR9Q6PD62 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTR9Q6PD62 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTR9Q6PD62 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.44■■□□□ 1.02
CTR9Q6PD62 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.44■■□□□ 1.02
CTR9Q6PD62 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CTR9Q6PD62 AC104581.1-202ENST00000635932 2618 ntBASIC21.43■■□□□ 1.02
CTR9Q6PD62 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CTR9Q6PD62 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTR9Q6PD62 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTR9Q6PD62 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CTR9Q6PD62 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTR9Q6PD62 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTR9Q6PD62 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.43■■□□□ 1.02
CTR9Q6PD62 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.43■■□□□ 1.02
CTR9Q6PD62 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.43■■□□□ 1.02
CTR9Q6PD62 VENTXP7-201ENST00000475503 772 ntBASIC21.43■■□□□ 1.02
CTR9Q6PD62 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.43■■□□□ 1.02
CTR9Q6PD62 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTR9Q6PD62 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTR9Q6PD62 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTR9Q6PD62 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.43■■□□□ 1.02
CTR9Q6PD62 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTR9Q6PD62 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTR9Q6PD62 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTR9Q6PD62 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTR9Q6PD62 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.43■■□□□ 1.02
CTR9Q6PD62 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTR9Q6PD62 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTR9Q6PD62 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTR9Q6PD62 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTR9Q6PD62 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTR9Q6PD62 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTR9Q6PD62 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTR9Q6PD62 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.42■■□□□ 1.02
CTR9Q6PD62 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
CTR9Q6PD62 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.42■■□□□ 1.02
CTR9Q6PD62 AC138894.3-201ENST00000603787 634 ntBASIC21.42■■□□□ 1.02
CTR9Q6PD62 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTR9Q6PD62 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTR9Q6PD62 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTR9Q6PD62 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.42■■□□□ 1.02
CTR9Q6PD62 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTR9Q6PD62 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTR9Q6PD62 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTR9Q6PD62 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 AC009113.1-201ENST00000570267 2443 ntBASIC21.41■■□□□ 1.02
CTR9Q6PD62 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTR9Q6PD62 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 AL096828.2-201ENST00000567259 1965 ntBASIC21.41■■□□□ 1.02
CTR9Q6PD62 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTR9Q6PD62 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTR9Q6PD62 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CTR9Q6PD62 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTR9Q6PD62 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTR9Q6PD62 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CTR9Q6PD62 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CTR9Q6PD62 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTR9Q6PD62 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTR9Q6PD62 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTR9Q6PD62 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CTR9Q6PD62 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 KRT18P31-201ENST00000506277 1292 ntBASIC21.41■■□□□ 1.02
CTR9Q6PD62 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTR9Q6PD62 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 AC090164.3-201ENST00000610780 2143 ntBASIC21.41■■□□□ 1.02
CTR9Q6PD62 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTR9Q6PD62 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CTR9Q6PD62 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CTR9Q6PD62 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CTR9Q6PD62 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CTR9Q6PD62 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTR9Q6PD62 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
CTR9Q6PD62 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTR9Q6PD62 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms