Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 AC018712.1-201ENST00000455767 687 ntBASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 AL671883.3-201ENST00000603274 991 ntBASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC62Q6P9F0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 AC018445.3-201ENST00000624177 1945 ntBASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 RBM17P3-201ENST00000417687 1192 ntBASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 AL031284.1-201ENST00000419297 478 ntBASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 AL590627.1-203ENST00000421194 1026 ntBASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 AC112698.1-201ENST00000510299 916 ntBASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCDC62Q6P9F0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 HCG11-201ENST00000411553 5696 ntBASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 AC120114.3-201ENST00000611923 658 ntBASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC62Q6P9F0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC62Q6P9F0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 AC132938.6-201ENST00000623828 1655 ntBASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 MTDHP3-201ENST00000594186 672 ntBASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC62Q6P9F0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms