Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 MFAP1P1-201ENST00000442257 1255 ntBASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
TMEM53Q6P2H8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 CRYGFP-201ENST00000418459 633 ntBASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 RBM17P1-201ENST00000453646 1190 ntBASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM53Q6P2H8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 UBALD1-205ENST00000590891 2641 ntBASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms