Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 AC104794.3-201ENST00000566840 1248 ntBASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 AL512343.1-201ENST00000605837 169 ntBASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 COX11-210ENST00000639671 696 ntBASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 AL109936.8-201ENST00000641772 604 ntBASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 Z98882.1-201ENST00000622160 2253 ntBASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 FAM86C2P-203ENST00000528684 1004 ntBASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 FOS-206ENST00000555347 1280 ntTSL 2 BASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 NAT9-224ENST00000583757 583 ntTSL 3 BASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 AC007225.1-201ENST00000566331 1836 ntBASIC20.16■□□□□ 0.82
COL13A1Q5TAT6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 DGCR5-201ENST00000399539 862 ntBASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL13A1Q5TAT6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL13A1Q5TAT6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 SPDYE7P-202ENST00000420373 878 ntBASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 KRT223P-202ENST00000449164 1292 ntBASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 API5-211ENST00000534695 560 ntTSL 5 BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 AC140912.1-201ENST00000577171 1054 ntBASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL13A1Q5TAT6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
COL13A1Q5TAT6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms