Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC011506.1-201ENST00000474329 610 ntBASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 RNA5SP413-201ENST00000516373 109 ntBASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
LINC00242Q5T6M2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
LINC00242Q5T6M2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LINC00242Q5T6M2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
LINC00242Q5T6M2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 MIR6786-201ENST00000616843 113 ntBASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC00242Q5T6M2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 NKILA-202ENST00000614771 2598 ntBASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 B3GAT3P1-201ENST00000471720 806 ntBASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 MIR3180-5-201ENST00000583743 153 ntBASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 AP000692.2-201ENST00000608391 879 ntBASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC00242Q5T6M2 AC036111.1-201ENST00000533973 1582 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms