Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 GOLGA2P4-201ENST00000441462 777 ntBASIC9.81□□□□□ -0.84
UBR4Q5T4S7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 AL512430.1-201ENST00000392575 860 ntBASIC9.8□□□□□ -0.84
UBR4Q5T4S7 RPS2P36-201ENST00000456516 831 ntBASIC9.8□□□□□ -0.84
UBR4Q5T4S7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 DGAT2L7P-201ENST00000602462 744 ntBASIC9.8□□□□□ -0.84
UBR4Q5T4S7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 RN7SL752P-201ENST00000463779 287 ntBASIC9.8□□□□□ -0.84
UBR4Q5T4S7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 AP001059.3-201ENST00000619053 235 ntBASIC9.8□□□□□ -0.84
UBR4Q5T4S7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 IGHV3-42-201ENST00000520410 361 ntBASIC9.8□□□□□ -0.84
UBR4Q5T4S7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 AC034236.2-201ENST00000606662 1610 ntBASIC9.8□□□□□ -0.84
UBR4Q5T4S7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 AC009118.2-201ENST00000613275 655 ntBASIC9.8□□□□□ -0.84
UBR4Q5T4S7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
UBR4Q5T4S7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AC068137.2-201ENST00000605408 478 ntBASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AC099522.2-201ENST00000607001 744 ntBASIC9.79□□□□□ -0.84
UBR4Q5T4S7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AC121338.2-201ENST00000622535 1744 ntBASIC9.79□□□□□ -0.84
UBR4Q5T4S7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AC091046.1-201ENST00000331871 207 ntBASIC9.79□□□□□ -0.84
UBR4Q5T4S7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AP001889.1-201ENST00000525414 633 ntBASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 GAS2L1P1-201ENST00000420145 1480 ntBASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AC009154.2-201ENST00000621177 724 ntBASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms