Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 FOSL1P1-201ENST00000511041 816 ntBASIC21.98■■□□□ 1.11
TTC39AQ5SRH9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.98■■□□□ 1.11
TTC39AQ5SRH9 AC099336.1-202ENST00000602961 463 ntBASIC21.98■■□□□ 1.11
TTC39AQ5SRH9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.98■■□□□ 1.11
TTC39AQ5SRH9 AC138894.3-201ENST00000603787 634 ntBASIC21.98■■□□□ 1.11
TTC39AQ5SRH9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TTC39AQ5SRH9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
TTC39AQ5SRH9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.98■■□□□ 1.11
TTC39AQ5SRH9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
TTC39AQ5SRH9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 MINOS1P3-201ENST00000457048 203 ntBASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39AQ5SRH9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 AL450487.1-201ENST00000426799 995 ntBASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 AC112698.1-201ENST00000510299 916 ntBASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.96■■□□□ 1.11
TTC39AQ5SRH9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TTC39AQ5SRH9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.11
TTC39AQ5SRH9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 RNF165-205ENST00000588679 2904 ntBASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TTC39AQ5SRH9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.94■■□□□ 1.1
TTC39AQ5SRH9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms