Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
LRRK2Q5S007 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.59■□□□□ 0.09
LRRK2Q5S007 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
LRRK2Q5S007 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRK2Q5S007 LINC02560-201ENST00000596379 459 ntBASIC15.59■□□□□ 0.09
LRRK2Q5S007 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LRRK2Q5S007 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRK2Q5S007 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRK2Q5S007 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRK2Q5S007 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRK2Q5S007 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRK2Q5S007 SPDYE21P-201ENST00000413323 827 ntBASIC15.58■□□□□ 0.09
LRRK2Q5S007 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRK2Q5S007 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.58■□□□□ 0.09
LRRK2Q5S007 IGHV3-65-201ENST00000523210 341 ntBASIC15.58■□□□□ 0.09
LRRK2Q5S007 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRK2Q5S007 AC009093.7-201ENST00000623853 1223 ntBASIC15.58■□□□□ 0.09
LRRK2Q5S007 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.58■□□□□ 0.09
LRRK2Q5S007 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRK2Q5S007 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRK2Q5S007 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LRRK2Q5S007 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRK2Q5S007 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
LRRK2Q5S007 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
LRRK2Q5S007 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.58■□□□□ 0.08
LRRK2Q5S007 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRK2Q5S007 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRK2Q5S007 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRRK2Q5S007 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRK2Q5S007 BCAR1-209ENST00000546196 1340 ntBASIC15.58■□□□□ 0.08
LRRK2Q5S007 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRK2Q5S007 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRK2Q5S007 ATP5G2P4-201ENST00000442175 420 ntBASIC15.58■□□□□ 0.08
LRRK2Q5S007 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.58■□□□□ 0.08
LRRK2Q5S007 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.58■□□□□ 0.08
LRRK2Q5S007 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.58■□□□□ 0.08
LRRK2Q5S007 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRK2Q5S007 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.58■□□□□ 0.08
LRRK2Q5S007 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.58■□□□□ 0.08
LRRK2Q5S007 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRK2Q5S007 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.57■□□□□ 0.08
LRRK2Q5S007 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.57■□□□□ 0.08
LRRK2Q5S007 AC025580.3-201ENST00000617932 1424 ntBASIC15.57■□□□□ 0.08
LRRK2Q5S007 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRK2Q5S007 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.57■□□□□ 0.08
LRRK2Q5S007 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.57■□□□□ 0.08
LRRK2Q5S007 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRK2Q5S007 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.57■□□□□ 0.08
LRRK2Q5S007 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LRRK2Q5S007 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.57■□□□□ 0.08
LRRK2Q5S007 AL596325.1-201ENST00000563991 1082 ntBASIC15.57■□□□□ 0.08
LRRK2Q5S007 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.57■□□□□ 0.08
LRRK2Q5S007 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRK2Q5S007 AL805961.1-202ENST00000641562 540 ntBASIC15.57■□□□□ 0.08
LRRK2Q5S007 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRK2Q5S007 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRK2Q5S007 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRK2Q5S007 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LRRK2Q5S007 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRK2Q5S007 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRK2Q5S007 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRK2Q5S007 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRK2Q5S007 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.57■□□□□ 0.08
LRRK2Q5S007 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRK2Q5S007 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRK2Q5S007 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.57■□□□□ 0.08
LRRK2Q5S007 AC096734.2-201ENST00000562054 433 ntBASIC15.57■□□□□ 0.08
LRRK2Q5S007 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LRRK2Q5S007 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.57■□□□□ 0.08
LRRK2Q5S007 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRK2Q5S007 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.57■□□□□ 0.08
LRRK2Q5S007 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRK2Q5S007 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRK2Q5S007 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRK2Q5S007 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.56■□□□□ 0.08
LRRK2Q5S007 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRK2Q5S007 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
LRRK2Q5S007 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LRRK2Q5S007 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.56■□□□□ 0.08
LRRK2Q5S007 KRT18P32-201ENST00000424695 1287 ntBASIC15.56■□□□□ 0.08
LRRK2Q5S007 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRK2Q5S007 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.56■□□□□ 0.08
LRRK2Q5S007 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms