Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 RBM17P3-201ENST00000417687 1192 ntBASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 AC018712.1-201ENST00000455767 687 ntBASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 AF186996.4-201ENST00000467186 377 ntBASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 RNPS1P1-201ENST00000507437 918 ntBASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 AL049840.3-201ENST00000602669 611 ntBASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 AL671883.3-201ENST00000603274 991 ntBASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNFT1Q5M7Z0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 IL9RP2-201ENST00000423948 1312 ntBASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 HNRNPDP1-201ENST00000439535 754 ntBASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 SLC25A1P1-201ENST00000528351 927 ntBASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 PHGDH-209ENST00000641074 1780 ntBASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.23■□□□□ 0.19
RNFT1Q5M7Z0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms