Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 FLJ13224-201ENST00000313737 1514 ntBASIC17.61■□□□□ 0.41
SGO1Q5FBB7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SGO1Q5FBB7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 OR6D1P-203ENST00000641209 4860 ntBASIC17.6■□□□□ 0.41
SGO1Q5FBB7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.6■□□□□ 0.41
SGO1Q5FBB7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 LTB4R2-202ENST00000528054 3092 ntBASIC17.6■□□□□ 0.41
SGO1Q5FBB7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGO1Q5FBB7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 AC010240.3-201ENST00000607688 395 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms