Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA3P83110 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.85■□□□□ 0.93
HTRA3P83110 AL024508.2-201ENST00000607749 1894 ntBASIC20.85■□□□□ 0.93
HTRA3P83110 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.85■□□□□ 0.93
HTRA3P83110 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.85■□□□□ 0.93
HTRA3P83110 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA3P83110 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.85■□□□□ 0.93
HTRA3P83110 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
HTRA3P83110 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA3P83110 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.85■□□□□ 0.93
HTRA3P83110 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HTRA3P83110 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HTRA3P83110 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.84■□□□□ 0.93
HTRA3P83110 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTRA3P83110 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.84■□□□□ 0.93
HTRA3P83110 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.84■□□□□ 0.93
HTRA3P83110 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.84■□□□□ 0.93
HTRA3P83110 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.84■□□□□ 0.93
HTRA3P83110 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.84■□□□□ 0.93
HTRA3P83110 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
HTRA3P83110 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.84■□□□□ 0.93
HTRA3P83110 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTRA3P83110 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTRA3P83110 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTRA3P83110 CU639417.3-201ENST00000624240 1404 ntBASIC20.84■□□□□ 0.93
HTRA3P83110 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HTRA3P83110 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
HTRA3P83110 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.84■□□□□ 0.93
HTRA3P83110 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.83■□□□□ 0.93
HTRA3P83110 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.83■□□□□ 0.93
HTRA3P83110 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTRA3P83110 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTRA3P83110 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HTRA3P83110 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTRA3P83110 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTRA3P83110 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HTRA3P83110 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.83■□□□□ 0.93
HTRA3P83110 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.83■□□□□ 0.93
HTRA3P83110 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.83■□□□□ 0.93
HTRA3P83110 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.83■□□□□ 0.93
HTRA3P83110 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.83■□□□□ 0.93
HTRA3P83110 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.83■□□□□ 0.93
HTRA3P83110 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.83■□□□□ 0.93
HTRA3P83110 AC140878.1-201ENST00000565277 250 ntBASIC20.83■□□□□ 0.93
HTRA3P83110 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.83■□□□□ 0.93
HTRA3P83110 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.83■□□□□ 0.93
HTRA3P83110 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.83■□□□□ 0.93
HTRA3P83110 AC017083.2-201ENST00000608069 979 ntBASIC20.83■□□□□ 0.93
HTRA3P83110 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.83■□□□□ 0.93
HTRA3P83110 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.83■□□□□ 0.93
HTRA3P83110 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HTRA3P83110 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTRA3P83110 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTRA3P83110 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
HTRA3P83110 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
HTRA3P83110 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HTRA3P83110 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HTRA3P83110 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HTRA3P83110 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.83■□□□□ 0.92
HTRA3P83110 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HTRA3P83110 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
HTRA3P83110 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.83■□□□□ 0.92
HTRA3P83110 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HTRA3P83110 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
HTRA3P83110 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.83■□□□□ 0.92
HTRA3P83110 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HTRA3P83110 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HTRA3P83110 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.82■□□□□ 0.92
HTRA3P83110 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.82■□□□□ 0.92
HTRA3P83110 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HTRA3P83110 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
HTRA3P83110 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HTRA3P83110 MIR149-201ENST00000384879 89 ntBASIC20.82■□□□□ 0.92
HTRA3P83110 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.82■□□□□ 0.92
HTRA3P83110 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.82■□□□□ 0.92
HTRA3P83110 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HTRA3P83110 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.82■□□□□ 0.92
HTRA3P83110 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.82■□□□□ 0.92
HTRA3P83110 AL512356.2-201ENST00000546955 174 ntBASIC20.82■□□□□ 0.92
HTRA3P83110 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HTRA3P83110 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.82■□□□□ 0.92
HTRA3P83110 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.82■□□□□ 0.92
HTRA3P83110 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC20.82■□□□□ 0.92
HTRA3P83110 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HTRA3P83110 AC026120.1-201ENST00000611536 926 ntBASIC20.82■□□□□ 0.92
HTRA3P83110 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.82■□□□□ 0.92
HTRA3P83110 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HTRA3P83110 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HTRA3P83110 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.82■□□□□ 0.92
HTRA3P83110 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HTRA3P83110 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HTRA3P83110 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.82■□□□□ 0.92
HTRA3P83110 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
HTRA3P83110 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HTRA3P83110 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.82■□□□□ 0.92
HTRA3P83110 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.82■□□□□ 0.92
HTRA3P83110 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.81■□□□□ 0.92
HTRA3P83110 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HTRA3P83110 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HTRA3P83110 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms