Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC092865.7-201ENST00000641832 219 ntBASIC14.61□□□□□ -0.07
CX3CL1P78423 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CX3CL1P78423 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CX3CL1P78423 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CX3CL1P78423 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.61□□□□□ -0.07
CX3CL1P78423 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CX3CL1P78423 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CL1P78423 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.6□□□□□ -0.07
CX3CL1P78423 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CL1P78423 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CL1P78423 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CL1P78423 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CX3CL1P78423 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CL1P78423 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
CX3CL1P78423 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.6□□□□□ -0.07
CX3CL1P78423 MIR149-201ENST00000384879 89 ntBASIC14.6□□□□□ -0.07
CX3CL1P78423 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.6□□□□□ -0.07
CX3CL1P78423 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.6□□□□□ -0.07
CX3CL1P78423 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.6□□□□□ -0.07
CX3CL1P78423 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.6□□□□□ -0.07
CX3CL1P78423 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CL1P78423 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CL1P78423 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.6□□□□□ -0.07
CX3CL1P78423 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.6□□□□□ -0.07
CX3CL1P78423 AL023973.1-201ENST00000624619 620 ntBASIC14.6□□□□□ -0.07
CX3CL1P78423 AC009102.3-201ENST00000623118 1491 ntBASIC14.6□□□□□ -0.07
CX3CL1P78423 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CL1P78423 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CL1P78423 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CL1P78423 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CX3CL1P78423 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CX3CL1P78423 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CL1P78423 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CL1P78423 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CL1P78423 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CL1P78423 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CL1P78423 AC012313.1-201ENST00000593393 3059 ntBASIC14.6□□□□□ -0.07
CX3CL1P78423 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CX3CL1P78423 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.59□□□□□ -0.07
CX3CL1P78423 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.59□□□□□ -0.07
CX3CL1P78423 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
CX3CL1P78423 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CX3CL1P78423 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CX3CL1P78423 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CX3CL1P78423 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.59□□□□□ -0.07
CX3CL1P78423 KRT18P57-201ENST00000443599 1254 ntBASIC14.59□□□□□ -0.07
CX3CL1P78423 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
CX3CL1P78423 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.59□□□□□ -0.07
CX3CL1P78423 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.59□□□□□ -0.07
CX3CL1P78423 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.59□□□□□ -0.07
CX3CL1P78423 GCSHP2-201ENST00000560971 527 ntBASIC14.59□□□□□ -0.07
CX3CL1P78423 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CX3CL1P78423 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.59□□□□□ -0.07
CX3CL1P78423 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.59□□□□□ -0.07
CX3CL1P78423 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.59□□□□□ -0.07
CX3CL1P78423 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.59□□□□□ -0.07
CX3CL1P78423 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.59□□□□□ -0.07
CX3CL1P78423 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.59□□□□□ -0.07
CX3CL1P78423 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CL1P78423 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
CX3CL1P78423 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CX3CL1P78423 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CX3CL1P78423 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CL1P78423 SDHAP2-201ENST00000455183 2001 ntBASIC14.58□□□□□ -0.08
CX3CL1P78423 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.58□□□□□ -0.08
CX3CL1P78423 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CL1P78423 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CL1P78423 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.58□□□□□ -0.08
CX3CL1P78423 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CL1P78423 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CL1P78423 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.58□□□□□ -0.08
CX3CL1P78423 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CL1P78423 AC139887.4-201ENST00000607877 719 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms